Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Gm9368-201ENSMUST00000219348 831 ntBASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Rprl1-201ENSMUST00000158050 327 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rnf20Q5DTM8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm6754-201ENSMUST00000117124 913 ntBASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm15547-201ENSMUST00000122152 333 ntBASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf20Q5DTM8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms