Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm11511-201ENSMUST00000118146 540 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm807-202ENSMUST00000224929 408 ntBASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rc3h1Q4VGL6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm14058-201ENSMUST00000116082 735 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm13035-201ENSMUST00000117496 342 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm12849-201ENSMUST00000120013 739 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm12196-201ENSMUST00000120954 262 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm5733-201ENSMUST00000190232 939 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms