Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm18893-201ENSMUST00000198416 943 ntBASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm43962-201ENSMUST00000203898 190 ntBASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
R3hdm4Q4VBF2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
R3hdm4Q4VBF2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Gm5616-201ENSMUST00000165252 384 ntBASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Gm8741-201ENSMUST00000174736 384 ntBASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
R3hdm4Q4VBF2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gm45433-201ENSMUST00000209386 247 ntBASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
R3hdm4Q4VBF2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms