Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Syne3Q4FZC9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm13875-201ENSMUST00000120162 282 ntBASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.93□□□□□ -0.34
Syne3Q4FZC9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm6621-201ENSMUST00000193251 772 ntBASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Syne3Q4FZC9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gm14723-201ENSMUST00000118686 215 ntBASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.92□□□□□ -0.34
Syne3Q4FZC9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms