Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm5733-201ENSMUST00000190232 939 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm18893-201ENSMUST00000198416 943 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm4482-201ENSMUST00000200876 742 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Prpf38aQ4FK66 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm11941-201ENSMUST00000119904 610 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm9555-201ENSMUST00000200908 583 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm43947-201ENSMUST00000203019 959 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm8959-201ENSMUST00000213150 571 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38aQ4FK66 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm7851-201ENSMUST00000117574 323 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm13611-201ENSMUST00000118269 318 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm14724-201ENSMUST00000118400 537 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Gm5705-201ENSMUST00000066241 711 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38aQ4FK66 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms