Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm3508-201ENSMUST00000186012 792 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm5733-201ENSMUST00000190232 939 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm37835-201ENSMUST00000193305 361 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm43930-201ENSMUST00000203868 845 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm6905-201ENSMUST00000205729 511 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.25□□□□□ -0.45
Usp30Q3UN04 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp30Q3UN04 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm14247-201ENSMUST00000120950 237 ntBASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.24□□□□□ -0.45
Usp30Q3UN04 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.24□□□□□ -0.45
Usp30Q3UN04 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gm1821-202ENSMUST00000227415 750 ntBASIC12.24□□□□□ -0.45
Usp30Q3UN04 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp30Q3UN04 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp30Q3UN04 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.23□□□□□ -0.45
Usp30Q3UN04 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp30Q3UN04 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.23□□□□□ -0.45
Usp30Q3UN04 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms