Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim43aQ3TL54 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43aQ3TL54 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43aQ3TL54 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43aQ3TL54 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43aQ3TL54 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43aQ3TL54 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms