Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm17063-201ENSMUST00000168135 456 ntBASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.19□□□□□ -0.3
Smpd1Q04519 AC154730.1-201ENSMUST00000227874 816 ntBASIC13.19□□□□□ -0.3
Smpd1Q04519 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smpd1Q04519 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Smpd1Q04519 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm15258-201ENSMUST00000153801 741 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm37560-201ENSMUST00000194289 1000 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm43708-201ENSMUST00000198857 961 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC13.18□□□□□ -0.3
Smpd1Q04519 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.18□□□□□ -0.3
Smpd1Q04519 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smpd1Q04519 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smpd1Q04519 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.17□□□□□ -0.3
Smpd1Q04519 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smpd1Q04519 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms