Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.22■□□□□ 0.03
Smarcc1P97496 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Gm23218-201ENSMUST00000158124 276 ntBASIC15.22■□□□□ 0.03
Smarcc1P97496 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.22■□□□□ 0.03
Smarcc1P97496 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.22■□□□□ 0.03
Smarcc1P97496 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Smarcc1P97496 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.22■□□□□ 0.03
Smarcc1P97496 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc1P97496 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm26013-201ENSMUST00000104404 119 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm15004-201ENSMUST00000119192 630 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm15207-201ENSMUST00000119259 442 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm5419-201ENSMUST00000119301 527 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm5714-201ENSMUST00000197343 566 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcc1P97496 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.21■□□□□ 0.03
Smarcc1P97496 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc1P97496 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc1P97496 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcc1P97496 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Smarcc1P97496 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcc1P97496 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Smarcc1P97496 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm14247-201ENSMUST00000120950 237 ntBASIC15.2■□□□□ 0.02
Smarcc1P97496 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcc1P97496 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarcc1P97496 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.2■□□□□ 0.02
Smarcc1P97496 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.2■□□□□ 0.02
Smarcc1P97496 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.2■□□□□ 0.02
Smarcc1P97496 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc1P97496 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc1P97496 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms