Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
Lig3P97386 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Lig3P97386 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.36□□□□□ -0.27
Lig3P97386 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lig3P97386 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lig3P97386 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.35□□□□□ -0.27
Lig3P97386 Gm43058-201ENSMUST00000197645 625 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.35□□□□□ -0.27
Lig3P97386 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.35□□□□□ -0.27
Lig3P97386 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lig3P97386 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.35□□□□□ -0.27
Lig3P97386 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lig3P97386 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Lig3P97386 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lig3P97386 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Lig3P97386 Gm19931-201ENSMUST00000198920 368 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Gm5904-201ENSMUST00000210286 865 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.34□□□□□ -0.27
Lig3P97386 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Lig3P97386 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.34□□□□□ -0.27
Lig3P97386 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.34□□□□□ -0.27
Lig3P97386 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lig3P97386 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.33□□□□□ -0.27
Lig3P97386 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Lig3P97386 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
Lig3P97386 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lig3P97386 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lig3P97386 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lig3P97386 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lig3P97386 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms