Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkp1P97350 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkp1P97350 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkp1P97350 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pkp1P97350 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pkp1P97350 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.2□□□□□ -0.14
Pkp1P97350 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.19□□□□□ -0.14
Pkp1P97350 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.19□□□□□ -0.14
Pkp1P97350 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.19□□□□□ -0.14
Pkp1P97350 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.19□□□□□ -0.14
Pkp1P97350 Gm11222-201ENSMUST00000119005 738 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Gm14726-201ENSMUST00000120623 896 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Gm15547-201ENSMUST00000122152 333 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.19□□□□□ -0.14
Pkp1P97350 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.19□□□□□ -0.14
Pkp1P97350 Gm8885-201ENSMUST00000189382 598 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Gm21769-201ENSMUST00000211922 111 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pkp1P97350 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Pkp1P97350 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.19□□□□□ -0.14
Pkp1P97350 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkp1P97350 Cog3-203ENSMUST00000227473 4197 ntBASIC14.19□□□□□ -0.14
Pkp1P97350 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkp1P97350 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Gm12015-201ENSMUST00000117065 843 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.18□□□□□ -0.14
Pkp1P97350 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Gm31256-201ENSMUST00000194705 506 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.18□□□□□ -0.14
Pkp1P97350 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Gm10312-201ENSMUST00000078515 489 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp1P97350 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.18□□□□□ -0.14
Pkp1P97350 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp1P97350 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Gm12036-201ENSMUST00000120008 530 ntBASIC14.17□□□□□ -0.14
Pkp1P97350 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms