Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 Gm22018-201ENSMUST00000104357 131 ntBASIC10.53□□□□□ -0.72
Atf1P81269 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.53□□□□□ -0.72
Atf1P81269 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Atf1P81269 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.53□□□□□ -0.72
Atf1P81269 Gm18187-201ENSMUST00000196476 984 ntBASIC10.53□□□□□ -0.72
Atf1P81269 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.53□□□□□ -0.72
Atf1P81269 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.53□□□□□ -0.72
Atf1P81269 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.53□□□□□ -0.72
Atf1P81269 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.53□□□□□ -0.72
Atf1P81269 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Atf1P81269 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atf1P81269 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.52□□□□□ -0.72
Atf1P81269 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Atf1P81269 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.52□□□□□ -0.72
Atf1P81269 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.52□□□□□ -0.72
Atf1P81269 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atf1P81269 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Atf1P81269 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.52□□□□□ -0.73
Atf1P81269 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Gm2546-201ENSMUST00000182630 991 ntBASIC10.52□□□□□ -0.73
Atf1P81269 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Gm28882-201ENSMUST00000185504 314 ntBASIC10.52□□□□□ -0.73
Atf1P81269 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Atf1P81269 Gm42693-201ENSMUST00000196779 631 ntBASIC10.52□□□□□ -0.73
Atf1P81269 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Atf1P81269 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Atf1P81269 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Atf1P81269 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.52□□□□□ -0.73
Atf1P81269 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.52□□□□□ -0.73
Atf1P81269 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Atf1P81269 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.52□□□□□ -0.73
Atf1P81269 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.52□□□□□ -0.73
Atf1P81269 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atf1P81269 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.51□□□□□ -0.73
Atf1P81269 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Atf1P81269 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Atf1P81269 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Atf1P81269 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Atf1P81269 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms