Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm5449-201ENSMUST00000081132 357 ntBASIC19.53■□□□□ 0.72
Cux2P70298 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cux2P70298 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cux2P70298 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC19.53■□□□□ 0.72
Cux2P70298 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 AC137950.2-202ENSMUST00000227150 1635 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Mir744-201ENSMUST00000103261 100 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Gm12337-201ENSMUST00000119634 400 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Gm24943-201ENSMUST00000158329 433 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Gm6606-201ENSMUST00000193613 947 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC19.52■□□□□ 0.72
Cux2P70298 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Gm5996-201ENSMUST00000211110 718 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC19.52■□□□□ 0.72
Cux2P70298 Gm6564-201ENSMUST00000075377 619 ntBASIC19.52■□□□□ 0.72
Cux2P70298 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cux2P70298 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cux2P70298 Gm1840-201ENSMUST00000051687 1432 ntBASIC19.52■□□□□ 0.71
Cux2P70298 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Cux2P70298 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cux2P70298 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Cux2P70298 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cux2P70298 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gm12389-201ENSMUST00000117696 418 ntBASIC19.51■□□□□ 0.71
Cux2P70298 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC19.51■□□□□ 0.71
Cux2P70298 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC19.51■□□□□ 0.71
Cux2P70298 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Cux2P70298 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gm45643-201ENSMUST00000211364 1484 ntBASIC19.51■□□□□ 0.71
Cux2P70298 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cux2P70298 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cux2P70298 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gm8146-201ENSMUST00000192106 1847 ntBASIC19.51■□□□□ 0.71
Cux2P70298 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC19.51■□□□□ 0.71
Cux2P70298 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Cux2P70298 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gm13700-201ENSMUST00000118624 1128 ntBASIC19.51■□□□□ 0.71
Cux2P70298 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC19.51■□□□□ 0.71
Cux2P70298 Gm43506-201ENSMUST00000200675 753 ntBASIC19.51■□□□□ 0.71
Cux2P70298 Gm7939-201ENSMUST00000201233 1050 ntBASIC19.51■□□□□ 0.71
Cux2P70298 BC080696-201ENSMUST00000202858 1218 ntBASIC19.51■□□□□ 0.71
Cux2P70298 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cux2P70298 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC19.5■□□□□ 0.71
Cux2P70298 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Cux2P70298 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Gm14165-201ENSMUST00000121456 952 ntBASIC19.5■□□□□ 0.71
Cux2P70298 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC19.5■□□□□ 0.71
Cux2P70298 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cux2P70298 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC19.5■□□□□ 0.71
Cux2P70298 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC19.5■□□□□ 0.71
Cux2P70298 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Gm7192-201ENSMUST00000210793 1137 ntBASIC19.5■□□□□ 0.71
Cux2P70298 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cux2P70298 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cux2P70298 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux2P70298 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cux2P70298 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux2P70298 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux2P70298 Gm14005-210ENSMUST00000225087 1413 ntBASIC19.49■□□□□ 0.71
Cux2P70298 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cux2P70298 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux2P70298 Gm44152-201ENSMUST00000205007 1691 ntBASIC19.49■□□□□ 0.71
Cux2P70298 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cux2P70298 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms