Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm5950-201ENSMUST00000213337 772 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm14760-201ENSMUST00000121831 999 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm14381-201ENSMUST00000122105 414 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm9630-201ENSMUST00000178304 885 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm31256-201ENSMUST00000194705 506 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.16□□□□□ -0.78
Pdlim4P70271 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm21769-201ENSMUST00000211922 111 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm39404-201ENSMUST00000216350 313 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.16□□□□□ -0.78
Pdlim4P70271 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.16□□□□□ -0.78
Pdlim4P70271 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pdlim4P70271 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pdlim4P70271 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms