Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.65□□□□□ -1.03
Rpl39P62892 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39P62892 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.64□□□□□ -1.03
Rpl39P62892 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Rpl39P62892 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm27243-201ENSMUST00000183964 521 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Mir6392-201ENSMUST00000184924 108 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm2495-201ENSMUST00000191160 466 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm37935-201ENSMUST00000192012 982 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm37922-201ENSMUST00000195596 455 ntBASIC8.64□□□□□ -1.03
Rpl39P62892 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rpl39P62892 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39P62892 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rpl39P62892 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39P62892 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.63□□□□□ -1.03
Rpl39P62892 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rpl39P62892 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39P62892 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.63□□□□□ -1.03
Rpl39P62892 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rpl39P62892 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39P62892 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms