Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nphp4P59240 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nphp4P59240 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nphp4P59240 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.33■□□□□ 0.2
Nphp4P59240 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nphp4P59240 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC16.32■□□□□ 0.2
Nphp4P59240 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Nphp4P59240 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.32■□□□□ 0.2
Nphp4P59240 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 CT485606.1-201ENSMUST00000213187 878 ntBASIC16.32■□□□□ 0.2
Nphp4P59240 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nphp4P59240 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nphp4P59240 Gm45199-201ENSMUST00000207640 1507 ntBASIC16.32■□□□□ 0.2
Nphp4P59240 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nphp4P59240 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.31■□□□□ 0.2
Nphp4P59240 Gm14665-201ENSMUST00000122294 557 ntBASIC16.31■□□□□ 0.2
Nphp4P59240 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.31■□□□□ 0.2
Nphp4P59240 Gm3551-201ENSMUST00000190750 664 ntBASIC16.31■□□□□ 0.2
Nphp4P59240 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.31■□□□□ 0.2
Nphp4P59240 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nphp4P59240 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nphp4P59240 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nphp4P59240 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nphp4P59240 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.31■□□□□ 0.2
Nphp4P59240 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nphp4P59240 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.31■□□□□ 0.2
Nphp4P59240 Gm36970-201ENSMUST00000193688 1859 ntBASIC16.31■□□□□ 0.2
Nphp4P59240 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nphp4P59240 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nphp4P59240 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 AC138329.2-201ENSMUST00000225579 1842 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm11960-201ENSMUST00000122068 925 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC16.3■□□□□ 0.2
Nphp4P59240 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16.3■□□□□ 0.2
Nphp4P59240 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm8342-201ENSMUST00000209839 757 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm4978-201ENSMUST00000071565 801 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Gm5451-201ENSMUST00000080545 579 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm1840-201ENSMUST00000051687 1432 ntBASIC16.3■□□□□ 0.2
Nphp4P59240 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nphp4P59240 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nphp4P59240 AC093022.4-203ENSMUST00000228523 2657 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms