Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Gm13019-201ENSMUST00000120000 276 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 Gm16219-201ENSMUST00000120096 274 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps33bP59016 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vps33bP59016 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Gm9081-201ENSMUST00000182346 991 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 Gm19015-201ENSMUST00000184002 1189 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps33bP59016 Gm40879-201ENSMUST00000220759 612 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.2■□□□□ 0.02
Vps33bP59016 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Vps33bP59016 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps33bP59016 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.19■□□□□ 0.02
Vps33bP59016 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Mir8093-201ENSMUST00000185043 137 ntBASIC15.19■□□□□ 0.02
Vps33bP59016 Gm18776-201ENSMUST00000188833 654 ntBASIC15.19■□□□□ 0.02
Vps33bP59016 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps33bP59016 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.19■□□□□ 0.02
Vps33bP59016 Gm42433-201ENSMUST00000196806 940 ntBASIC15.19■□□□□ 0.02
Vps33bP59016 Gm43671-201ENSMUST00000200422 433 ntBASIC15.19■□□□□ 0.02
Vps33bP59016 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps33bP59016 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
Vps33bP59016 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps33bP59016 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps33bP59016 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm14234-201ENSMUST00000119539 845 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Gm5909-201ENSMUST00000119768 1281 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps33bP59016 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm9916-201ENSMUST00000192943 1228 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Ighv1-2-201ENSMUST00000195325 378 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Vps33bP59016 Gm5982-201ENSMUST00000196234 512 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Gm7504-201ENSMUST00000201449 424 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 Gm29763-201ENSMUST00000205306 616 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 BC106175-202ENSMUST00000219344 1213 ntBASIC15.18■□□□□ 0.02
Vps33bP59016 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps33bP59016 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps33bP59016 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps33bP59016 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps33bP59016 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms