Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.72□□□□□ -0.21
Rrp1P56183 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rrp1P56183 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.71□□□□□ -0.21
Rrp1P56183 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.71□□□□□ -0.21
Rrp1P56183 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.71□□□□□ -0.21
Rrp1P56183 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm7809-201ENSMUST00000153199 742 ntBASIC13.71□□□□□ -0.21
Rrp1P56183 Mir1982-201ENSMUST00000157368 74 ntBASIC13.71□□□□□ -0.21
Rrp1P56183 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.71□□□□□ -0.21
Rrp1P56183 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm6222-202ENSMUST00000182143 629 ntBASIC13.71□□□□□ -0.21
Rrp1P56183 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.71□□□□□ -0.21
Rrp1P56183 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rrp1P56183 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rrp1P56183 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rrp1P56183 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.71□□□□□ -0.22
Rrp1P56183 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.71□□□□□ -0.22
Rrp1P56183 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rrp1P56183 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rrp1P56183 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rrp1P56183 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rrp1P56183 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Rrp1P56183 Gm24934-201ENSMUST00000103764 111 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Gm23912-201ENSMUST00000104687 87 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
Rrp1P56183 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rrp1P56183 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rrp1P56183 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rrp1P56183 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rrp1P56183 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rrp1P56183 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.7□□□□□ -0.22
Rrp1P56183 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rrp1P56183 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rrp1P56183 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.69□□□□□ -0.22
Rrp1P56183 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rrp1P56183 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rrp1P56183 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms