Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ddx6P54823 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ddx6P54823 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm19287-201ENSMUST00000203190 358 ntBASIC12.36□□□□□ -0.43
Ddx6P54823 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ddx6P54823 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.36□□□□□ -0.43
Ddx6P54823 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.36□□□□□ -0.43
Ddx6P54823 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ddx6P54823 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx6P54823 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx6P54823 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm17391-201ENSMUST00000171036 126 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm27530-201ENSMUST00000184096 98 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm45575-201ENSMUST00000210283 548 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ddx6P54823 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.35□□□□□ -0.43
Ddx6P54823 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx6P54823 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx6P54823 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ddx6P54823 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ddx6P54823 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms