Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh6P54276 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.33■□□□□ 0.05
Msh6P54276 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Msh6P54276 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Msh6P54276 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Msh6P54276 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Msh6P54276 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.33■□□□□ 0.04
Msh6P54276 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.33■□□□□ 0.04
Msh6P54276 Gm15004-201ENSMUST00000119192 630 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Mir1956-201ENSMUST00000157748 65 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.33■□□□□ 0.04
Msh6P54276 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.33■□□□□ 0.04
Msh6P54276 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Gm37028-201ENSMUST00000194276 107 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Gm45575-201ENSMUST00000210283 548 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Msh6P54276 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.33■□□□□ 0.04
Msh6P54276 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh6P54276 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.33■□□□□ 0.04
Msh6P54276 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Msh6P54276 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.32■□□□□ 0.04
Msh6P54276 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Gm22711-201ENSMUST00000116890 133 ntBASIC15.32■□□□□ 0.04
Msh6P54276 Gm12579-201ENSMUST00000118040 783 ntBASIC15.32■□□□□ 0.04
Msh6P54276 Gm28388-201ENSMUST00000186262 437 ntBASIC15.32■□□□□ 0.04
Msh6P54276 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.32■□□□□ 0.04
Msh6P54276 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.32■□□□□ 0.04
Msh6P54276 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.32■□□□□ 0.04
Msh6P54276 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.32■□□□□ 0.04
Msh6P54276 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Msh6P54276 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Msh6P54276 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.32■□□□□ 0.04
Msh6P54276 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh6P54276 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Gm25880-201ENSMUST00000104331 132 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm8731-201ENSMUST00000118088 412 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm12516-201ENSMUST00000120819 385 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.31■□□□□ 0.04
Msh6P54276 Gm21092-201ENSMUST00000178995 955 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm27390-201ENSMUST00000184516 176 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm9136-201ENSMUST00000193368 454 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm42518-201ENSMUST00000196277 938 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Gm43186-201ENSMUST00000198130 824 ntBASIC15.31■□□□□ 0.04
Msh6P54276 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Msh6P54276 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms