Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Atxn1P54254 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Atxn1P54254 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm14644-201ENSMUST00000116671 647 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Gm25545-201ENSMUST00000122673 323 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.12□□□□□ -0.47
Atxn1P54254 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Snora73b-201ENSMUST00000083419 205 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atxn1P54254 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.12□□□□□ -0.47
Atxn1P54254 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Atxn1P54254 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atxn1P54254 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Gm11801-201ENSMUST00000117807 746 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Gm13600-201ENSMUST00000117949 744 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Gm25881-201ENSMUST00000157783 103 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Atxn1P54254 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.11□□□□□ -0.47
Atxn1P54254 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.11□□□□□ -0.47
Atxn1P54254 Gm18038-201ENSMUST00000197900 485 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Gm7902-201ENSMUST00000198842 947 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Mir7686-201ENSMUST00000200604 57 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.11□□□□□ -0.47
Atxn1P54254 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms