Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox3P53784 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.7□□□□□ -0.54
Sox3P53784 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm13296-201ENSMUST00000117854 997 ntBASIC11.7□□□□□ -0.54
Sox3P53784 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.7□□□□□ -0.54
Sox3P53784 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.7□□□□□ -0.54
Sox3P53784 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.7□□□□□ -0.54
Sox3P53784 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.7□□□□□ -0.54
Sox3P53784 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.7□□□□□ -0.54
Sox3P53784 Gm18730-201ENSMUST00000218038 343 ntBASIC11.7□□□□□ -0.54
Sox3P53784 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox3P53784 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox3P53784 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox3P53784 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox3P53784 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.7□□□□□ -0.54
Sox3P53784 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Sox3P53784 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox3P53784 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox3P53784 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.69□□□□□ -0.54
Sox3P53784 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Daam2-202ENSMUST00000224595 1926 ntBASIC11.69□□□□□ -0.54
Sox3P53784 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.69□□□□□ -0.54
Sox3P53784 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sox3P53784 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox3P53784 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.69□□□□□ -0.54
Sox3P53784 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.69□□□□□ -0.54
Sox3P53784 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox3P53784 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox3P53784 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox3P53784 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox3P53784 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms