Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Ercc3P49135 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.46□□□□□ -0.1
Ercc3P49135 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.1
Ercc3P49135 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.46□□□□□ -0.1
Ercc3P49135 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc3P49135 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.45□□□□□ -0.1
Ercc3P49135 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.45□□□□□ -0.1
Ercc3P49135 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ercc3P49135 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.45□□□□□ -0.1
Ercc3P49135 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.45□□□□□ -0.1
Ercc3P49135 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.45□□□□□ -0.1
Ercc3P49135 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.45□□□□□ -0.1
Ercc3P49135 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Ercc3P49135 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ercc3P49135 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc3P49135 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ercc3P49135 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm7722-201ENSMUST00000120646 741 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gm13097-201ENSMUST00000210722 397 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.44□□□□□ -0.1
Ercc3P49135 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ercc3P49135 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ercc3P49135 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ercc3P49135 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ercc3P49135 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms