Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Brca1P48754 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Brca1P48754 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.42□□□□□ -0.26
Brca1P48754 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Gm6630-201ENSMUST00000119199 454 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.42□□□□□ -0.26
Brca1P48754 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Gm18801-201ENSMUST00000186616 536 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Gm8197-202ENSMUST00000193422 934 ntBASIC13.42□□□□□ -0.26
Brca1P48754 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.42□□□□□ -0.26
Brca1P48754 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.42□□□□□ -0.26
Brca1P48754 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.42□□□□□ -0.26
Brca1P48754 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.42□□□□□ -0.26
Brca1P48754 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Acot6-202ENSMUST00000222921 3622 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.42□□□□□ -0.26
Brca1P48754 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Brca1P48754 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brca1P48754 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brca1P48754 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Brca1P48754 Gm25998-201ENSMUST00000175397 53 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm28833-201ENSMUST00000189671 559 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm43854-201ENSMUST00000200418 394 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Brca1P48754 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.41□□□□□ -0.26
Brca1P48754 Gm34379-201ENSMUST00000195036 290 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm42511-201ENSMUST00000196160 234 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Gm39288-201ENSMUST00000210554 446 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Brca1P48754 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brca1P48754 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.41□□□□□ -0.26
Brca1P48754 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms