Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Slc6a1P31648 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Gm2495-201ENSMUST00000191160 466 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.48□□□□□ -0.73
Slc6a1P31648 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc6a1P31648 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc6a1P31648 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.47□□□□□ -0.73
Slc6a1P31648 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.47□□□□□ -0.73
Slc6a1P31648 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms