Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Gm25911-201ENSMUST00000157621 56 ntBASIC11.2□□□□□ -0.62
Nedd8P29595 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Gm27680-201ENSMUST00000184192 160 ntBASIC11.2□□□□□ -0.62
Nedd8P29595 Gm28693-202ENSMUST00000190758 331 ntBASIC11.2□□□□□ -0.62
Nedd8P29595 Gm38223-201ENSMUST00000194484 695 ntBASIC11.2□□□□□ -0.62
Nedd8P29595 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.2□□□□□ -0.62
Nedd8P29595 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.2□□□□□ -0.62
Nedd8P29595 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Nedd8P29595 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.19□□□□□ -0.62
Nedd8P29595 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Nedd8P29595 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nedd8P29595 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Mir449b-201ENSMUST00000104833 80 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm12384-201ENSMUST00000119228 919 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm15703-201ENSMUST00000120250 880 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm15467-201ENSMUST00000120582 445 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm14767-201ENSMUST00000121559 586 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.19□□□□□ -0.62
Nedd8P29595 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.19□□□□□ -0.62
Nedd8P29595 Gm38294-201ENSMUST00000192831 381 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm5279-201ENSMUST00000199575 745 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.19□□□□□ -0.62
Nedd8P29595 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nedd8P29595 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.19□□□□□ -0.62
Nedd8P29595 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.19□□□□□ -0.62
Nedd8P29595 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nedd8P29595 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.19□□□□□ -0.62
Nedd8P29595 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.19□□□□□ -0.62
Nedd8P29595 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nedd8P29595 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Nedd8P29595 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.18□□□□□ -0.62
Nedd8P29595 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.18□□□□□ -0.62
Nedd8P29595 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.18□□□□□ -0.62
Nedd8P29595 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
Nedd8P29595 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.18□□□□□ -0.62
Nedd8P29595 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.18□□□□□ -0.62
Nedd8P29595 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.18□□□□□ -0.62
Nedd8P29595 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nedd8P29595 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms