Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Pde6bP23440 Gm11989-201ENSMUST00000117240 672 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Gm11362-201ENSMUST00000118838 850 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.34□□□□□ -0.27
Pde6bP23440 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.34□□□□□ -0.27
Pde6bP23440 Gm9022-201ENSMUST00000182482 992 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pde6bP23440 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pde6bP23440 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pde6bP23440 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.33□□□□□ -0.27
Pde6bP23440 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Pde6bP23440 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pde6bP23440 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm5616-201ENSMUST00000165252 384 ntBASIC13.33□□□□□ -0.28
Pde6bP23440 Gm8741-201ENSMUST00000174736 384 ntBASIC13.33□□□□□ -0.28
Pde6bP23440 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm44958-201ENSMUST00000203734 736 ntBASIC13.33□□□□□ -0.28
Pde6bP23440 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.33□□□□□ -0.28
Pde6bP23440 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pde6bP23440 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pde6bP23440 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pde6bP23440 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pde6bP23440 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.32□□□□□ -0.28
Pde6bP23440 Gm24231-201ENSMUST00000104315 133 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms