Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm11964-201ENSMUST00000120982 444 ntBASIC11.71□□□□□ -0.53
BdnfP21237 Gm11424-201ENSMUST00000121929 829 ntBASIC11.71□□□□□ -0.53
BdnfP21237 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm29127-201ENSMUST00000188304 517 ntBASIC11.71□□□□□ -0.53
BdnfP21237 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
BdnfP21237 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BdnfP21237 Gm24526-201ENSMUST00000082921 158 ntBASIC11.71□□□□□ -0.53
BdnfP21237 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BdnfP21237 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
BdnfP21237 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
BdnfP21237 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.71□□□□□ -0.54
BdnfP21237 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.71□□□□□ -0.54
BdnfP21237 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
BdnfP21237 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BdnfP21237 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
BdnfP21237 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.7□□□□□ -0.54
BdnfP21237 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
BdnfP21237 Gm12390-201ENSMUST00000117897 397 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.7□□□□□ -0.54
BdnfP21237 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.7□□□□□ -0.54
BdnfP21237 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.7□□□□□ -0.54
BdnfP21237 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Gm26927-201ENSMUST00000182385 965 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Gm27243-201ENSMUST00000183964 521 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Gm44882-201ENSMUST00000205702 802 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.7□□□□□ -0.54
BdnfP21237 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Gm24136-201ENSMUST00000083374 165 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.7□□□□□ -0.54
BdnfP21237 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.7□□□□□ -0.54
BdnfP21237 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
BdnfP21237 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
BdnfP21237 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
BdnfP21237 Gm12502-201ENSMUST00000120197 444 ntBASIC11.69□□□□□ -0.54
BdnfP21237 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.69□□□□□ -0.54
BdnfP21237 Gm11597-201ENSMUST00000121423 964 ntBASIC11.69□□□□□ -0.54
BdnfP21237 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms