Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf9P20334 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm4909-201ENSMUST00000118749 794 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm8738-201ENSMUST00000172606 329 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm4207-201ENSMUST00000173144 960 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm5523-201ENSMUST00000180415 997 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Mir7032-201ENSMUST00000185154 79 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm37042-201ENSMUST00000193816 581 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm31256-201ENSMUST00000194705 506 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm38262-201ENSMUST00000194760 1382 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 AU022133-201ENSMUST00000200601 873 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm18584-201ENSMUST00000203098 964 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 AC163038.1-201ENSMUST00000223632 1142 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf9P20334 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf9P20334 Gm14726-201ENSMUST00000120623 896 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms