Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
Cdx1P18111 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx1P18111 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm13612-201ENSMUST00000119276 390 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx1P18111 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Mir6420-201ENSMUST00000185032 102 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Gm29127-201ENSMUST00000188304 517 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm37424-201ENSMUST00000191727 561 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Gm45331-201ENSMUST00000209868 554 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm10012-201ENSMUST00000078252 192 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.87□□□□□ -0.83
Cdx1P18111 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.87□□□□□ -0.83
Cdx1P18111 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx1P18111 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx1P18111 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cdx1P18111 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Cdx1P18111 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cdx1P18111 Mir698-201ENSMUST00000102164 109 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.86□□□□□ -0.83
Cdx1P18111 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm13392-201ENSMUST00000117708 150 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Gm13689-201ENSMUST00000119360 685 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.86□□□□□ -0.83
Cdx1P18111 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm24196-201ENSMUST00000179161 110 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms