Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm27486-201ENSMUST00000184923 80 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm5781-201ENSMUST00000219792 443 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.06□□□□□ -0.8
Cxcl1P12850 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cxcl1P12850 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm23912-201ENSMUST00000104687 87 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm13736-201ENSMUST00000119272 253 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm14928-201ENSMUST00000120198 477 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm13342-201ENSMUST00000121055 207 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm27847-201ENSMUST00000183711 107 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm27375-201ENSMUST00000183799 107 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.05□□□□□ -0.8
Cxcl1P12850 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.05□□□□□ -0.8
Cxcl1P12850 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms