Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.27□□□□□ -0.28
Chmp6P0C0A3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Chmp6P0C0A3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp6P0C0A3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp6P0C0A3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp6P0C0A3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm24255-201ENSMUST00000104481 128 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm44124-201ENSMUST00000204159 472 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp6P0C0A3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp6P0C0A3 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms