Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Gm45668-201ENSMUST00000211271 493 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.51□□□□□ -0.57
ApoeP08226 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ApoeP08226 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.51□□□□□ -0.57
ApoeP08226 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.51□□□□□ -0.57
ApoeP08226 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.51□□□□□ -0.57
ApoeP08226 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.51□□□□□ -0.57
ApoeP08226 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.51□□□□□ -0.57
ApoeP08226 Gm28911-201ENSMUST00000188837 117 ntBASIC11.51□□□□□ -0.57
ApoeP08226 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.51□□□□□ -0.57
ApoeP08226 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.51□□□□□ -0.57
ApoeP08226 Gm44958-201ENSMUST00000203734 736 ntBASIC11.51□□□□□ -0.57
ApoeP08226 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.51□□□□□ -0.57
ApoeP08226 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.51□□□□□ -0.57
ApoeP08226 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.51□□□□□ -0.57
ApoeP08226 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.51□□□□□ -0.57
ApoeP08226 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.51□□□□□ -0.57
ApoeP08226 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ApoeP08226 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ApoeP08226 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.51□□□□□ -0.57
ApoeP08226 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ApoeP08226 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
ApoeP08226 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
ApoeP08226 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
ApoeP08226 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ApoeP08226 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.5□□□□□ -0.57
ApoeP08226 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.5□□□□□ -0.57
ApoeP08226 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.5□□□□□ -0.57
ApoeP08226 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.5□□□□□ -0.57
ApoeP08226 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ApoeP08226 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.5□□□□□ -0.57
ApoeP08226 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms