Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CfdP03953 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.16□□□□□ -0.78
CfdP03953 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.16□□□□□ -0.78
CfdP03953 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.15□□□□□ -0.78
CfdP03953 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.15□□□□□ -0.78
CfdP03953 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 Gm10156-201ENSMUST00000122364 462 ntBASIC10.15□□□□□ -0.78
CfdP03953 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Gm2231-201ENSMUST00000125661 612 ntBASIC10.15□□□□□ -0.78
CfdP03953 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.15□□□□□ -0.78
CfdP03953 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Gm9136-201ENSMUST00000193368 454 ntBASIC10.15□□□□□ -0.78
CfdP03953 Gm6218-201ENSMUST00000219812 628 ntBASIC10.15□□□□□ -0.78
CfdP03953 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.15□□□□□ -0.78
CfdP03953 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CfdP03953 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CfdP03953 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.15□□□□□ -0.78
CfdP03953 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CfdP03953 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.15□□□□□ -0.78
CfdP03953 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.15□□□□□ -0.78
CfdP03953 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CfdP03953 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
CfdP03953 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CfdP03953 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.15□□□□□ -0.79
CfdP03953 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
CfdP03953 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.14□□□□□ -0.79
CfdP03953 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.14□□□□□ -0.79
CfdP03953 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
CfdP03953 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.14□□□□□ -0.79
CfdP03953 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CfdP03953 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CfdP03953 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
CfdP03953 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.14□□□□□ -0.79
CfdP03953 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.14□□□□□ -0.79
CfdP03953 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.14□□□□□ -0.79
CfdP03953 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.14□□□□□ -0.79
CfdP03953 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.14□□□□□ -0.79
CfdP03953 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.14□□□□□ -0.79
CfdP03953 Gm8463-201ENSMUST00000208573 613 ntBASIC10.14□□□□□ -0.79
CfdP03953 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.14□□□□□ -0.79
CfdP03953 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CfdP03953 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CfdP03953 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CfdP03953 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms