Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.54□□□□□ -0.4
CopeO89079 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopeO89079 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Gm26232-201ENSMUST00000083360 166 ntBASIC12.54□□□□□ -0.4
CopeO89079 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.54□□□□□ -0.4
CopeO89079 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.54□□□□□ -0.4
CopeO89079 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.54□□□□□ -0.4
CopeO89079 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.53□□□□□ -0.4
CopeO89079 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.53□□□□□ -0.4
CopeO89079 Gm12036-201ENSMUST00000120008 530 ntBASIC12.53□□□□□ -0.4
CopeO89079 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
CopeO89079 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Auts2-212ENSMUST00000178555 309 ntBASIC12.53□□□□□ -0.4
CopeO89079 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.53□□□□□ -0.4
CopeO89079 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Gm10268-201ENSMUST00000085340 555 ntBASIC12.53□□□□□ -0.4
CopeO89079 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.53□□□□□ -0.4
CopeO89079 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CopeO89079 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CopeO89079 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopeO89079 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopeO89079 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
CopeO89079 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopeO89079 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopeO89079 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.52□□□□□ -0.4
CopeO89079 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.52□□□□□ -0.41
CopeO89079 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CopeO89079 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.52□□□□□ -0.41
CopeO89079 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CopeO89079 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.52□□□□□ -0.41
CopeO89079 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Gm5781-201ENSMUST00000219792 443 ntBASIC12.52□□□□□ -0.41
CopeO89079 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.52□□□□□ -0.41
CopeO89079 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CopeO89079 Gm10076-201ENSMUST00000073238 384 ntBASIC12.52□□□□□ -0.41
CopeO89079 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.52□□□□□ -0.41
CopeO89079 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms