Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm26361-201ENSMUST00000158868 186 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.06□□□□□ -0.48
Pdlim1O70400 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim1O70400 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Gm5706-201ENSMUST00000181525 993 ntBASIC12.05□□□□□ -0.48
Pdlim1O70400 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.05□□□□□ -0.48
Pdlim1O70400 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.05□□□□□ -0.48
Pdlim1O70400 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim1O70400 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim1O70400 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms