Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Gm27023-201ENSMUST00000182372 285 ntBASIC11.32□□□□□ -0.6
BckdkO55028 Gm27390-201ENSMUST00000184516 176 ntBASIC11.32□□□□□ -0.6
BckdkO55028 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.32□□□□□ -0.6
BckdkO55028 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.32□□□□□ -0.6
BckdkO55028 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.32□□□□□ -0.6
BckdkO55028 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.32□□□□□ -0.6
BckdkO55028 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.32□□□□□ -0.6
BckdkO55028 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
BckdkO55028 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
BckdkO55028 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
BckdkO55028 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BckdkO55028 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.31□□□□□ -0.6
BckdkO55028 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Gm23270-201ENSMUST00000104055 131 ntBASIC11.31□□□□□ -0.6
BckdkO55028 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
BckdkO55028 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.31□□□□□ -0.6
BckdkO55028 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
BckdkO55028 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
BckdkO55028 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.31□□□□□ -0.6
BckdkO55028 Gm37201-201ENSMUST00000191845 523 ntBASIC11.31□□□□□ -0.6
BckdkO55028 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.31□□□□□ -0.6
BckdkO55028 Gm5363-201ENSMUST00000211927 938 ntBASIC11.31□□□□□ -0.6
BckdkO55028 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.31□□□□□ -0.6
BckdkO55028 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
BckdkO55028 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BckdkO55028 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.31□□□□□ -0.6
BckdkO55028 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
BckdkO55028 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BckdkO55028 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms