Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Itgb3O54890 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Itgb3O54890 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Itgb3O54890 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.9□□□□□ -0.35
Itgb3O54890 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Itgb3O54890 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Itgb3O54890 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Gm4909-201ENSMUST00000118749 794 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Gm4607-201ENSMUST00000206649 577 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.89□□□□□ -0.35
Itgb3O54890 Gm19208-201ENSMUST00000213861 912 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.89□□□□□ -0.35
Itgb3O54890 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.89□□□□□ -0.35
Itgb3O54890 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Itgb3O54890 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Itgb3O54890 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Itgb3O54890 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Itgb3O54890 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Itgb3O54890 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Itgb3O54890 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Itgb3O54890 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.88□□□□□ -0.35
Itgb3O54890 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.88□□□□□ -0.35
Itgb3O54890 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.88□□□□□ -0.35
Itgb3O54890 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.88□□□□□ -0.35
Itgb3O54890 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Gm26461-201ENSMUST00000175064 290 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Itgb3O54890 Gm27552-201ENSMUST00000183351 62 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Gm27844-201ENSMUST00000183613 62 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.88□□□□□ -0.35
Itgb3O54890 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.88□□□□□ -0.35
Itgb3O54890 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Itgb3O54890 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Itgb3O54890 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.87□□□□□ -0.35
Itgb3O54890 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Itgb3O54890 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Itgb3O54890 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.87□□□□□ -0.35
Itgb3O54890 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Itgb3O54890 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.87□□□□□ -0.35
Itgb3O54890 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.87□□□□□ -0.35
Itgb3O54890 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.87□□□□□ -0.35
Itgb3O54890 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Itgb3O54890 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms