Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.54□□□□□ -0.4
Sdc4O35988 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Gm43184-201ENSMUST00000197247 542 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Gm270-201ENSMUST00000223010 976 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sdc4O35988 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sdc4O35988 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sdc4O35988 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sdc4O35988 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sdc4O35988 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sdc4O35988 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.53□□□□□ -0.4
Sdc4O35988 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.53□□□□□ -0.4
Sdc4O35988 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm4034-201ENSMUST00000187674 480 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.53□□□□□ -0.4
Sdc4O35988 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.53□□□□□ -0.4
Sdc4O35988 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sdc4O35988 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.53□□□□□ -0.4
Sdc4O35988 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc4O35988 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc4O35988 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sdc4O35988 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Sdc4O35988 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Sdc4O35988 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sdc4O35988 Gm11511-201ENSMUST00000118146 540 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.52□□□□□ -0.41
Sdc4O35988 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Sdc4O35988 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.52□□□□□ -0.41
Sdc4O35988 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Sdc4O35988 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc4O35988 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.52□□□□□ -0.41
Sdc4O35988 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sdc4O35988 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms