Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.9□□□□□ -0.5
Npc1O35604 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.9□□□□□ -0.5
Npc1O35604 Gm6963-201ENSMUST00000147879 379 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Gm18056-201ENSMUST00000207670 568 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Gm18061-201ENSMUST00000208350 562 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Gm18063-201ENSMUST00000208529 568 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Gm18052-201ENSMUST00000208750 559 ntBASIC11.9□□□□□ -0.5
Npc1O35604 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.9□□□□□ -0.5
Npc1O35604 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Npc1O35604 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Npc1O35604 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Npc1O35604 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npc1O35604 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npc1O35604 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Npc1O35604 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Npc1O35604 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Npc1O35604 Gm9083-201ENSMUST00000120423 819 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Gm2383-201ENSMUST00000181461 807 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 Gm45598-202ENSMUST00000210719 986 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.89□□□□□ -0.51
Npc1O35604 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.89□□□□□ -0.51
Npc1O35604 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm9996-201ENSMUST00000070359 913 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Npc1O35604 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.89□□□□□ -0.51
Npc1O35604 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npc1O35604 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms