Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Alx4O35137 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Gm12502-201ENSMUST00000120197 444 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Gm13342-201ENSMUST00000121055 207 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.86□□□□□ -0.67
Alx4O35137 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm27486-201ENSMUST00000184923 80 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.86□□□□□ -0.67
Alx4O35137 Gm42693-201ENSMUST00000196779 631 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Gm18584-201ENSMUST00000203098 964 ntBASIC10.86□□□□□ -0.67
Alx4O35137 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.86□□□□□ -0.67
Alx4O35137 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.86□□□□□ -0.67
Alx4O35137 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.86□□□□□ -0.67
Alx4O35137 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.86□□□□□ -0.67
Alx4O35137 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Alx4O35137 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Alx4O35137 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Alx4O35137 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Alx4O35137 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Alx4O35137 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.85□□□□□ -0.67
Alx4O35137 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.85□□□□□ -0.67
Alx4O35137 Gm9002-201ENSMUST00000178437 499 ntBASIC10.85□□□□□ -0.67
Alx4O35137 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gm27847-201ENSMUST00000183711 107 ntBASIC10.85□□□□□ -0.67
Alx4O35137 Gm27375-201ENSMUST00000183799 107 ntBASIC10.85□□□□□ -0.67
Alx4O35137 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Gm9908-201ENSMUST00000211534 448 ntBASIC10.85□□□□□ -0.67
Alx4O35137 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.85□□□□□ -0.67
Alx4O35137 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms