Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.52□□□□□ -0.4
Trove2O08848 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trove2O08848 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trove2O08848 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trove2O08848 Gm2231-201ENSMUST00000125661 612 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Gm26185-201ENSMUST00000157692 266 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Gm22331-201ENSMUST00000158066 136 ntBASIC12.52□□□□□ -0.41
Trove2O08848 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.52□□□□□ -0.41
Trove2O08848 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Gm27847-201ENSMUST00000183711 107 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Gm27375-201ENSMUST00000183799 107 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Gm37497-201ENSMUST00000195830 798 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 Gm5035-201ENSMUST00000215581 927 ntBASIC12.52□□□□□ -0.41
Trove2O08848 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.52□□□□□ -0.41
Trove2O08848 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trove2O08848 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trove2O08848 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trove2O08848 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trove2O08848 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.51□□□□□ -0.41
Trove2O08848 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.51□□□□□ -0.41
Trove2O08848 Gm11424-201ENSMUST00000121929 829 ntBASIC12.51□□□□□ -0.41
Trove2O08848 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Gm24644-201ENSMUST00000157114 139 ntBASIC12.51□□□□□ -0.41
Trove2O08848 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trove2O08848 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trove2O08848 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trove2O08848 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Gm16479-201ENSMUST00000121706 932 ntBASIC12.5□□□□□ -0.41
Trove2O08848 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.5□□□□□ -0.41
Trove2O08848 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.5□□□□□ -0.41
Trove2O08848 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trove2O08848 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms