Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm27194-201ENSMUST00000175753 2936 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm3671-201ENSMUST00000182463 1007 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Mir6407-201ENSMUST00000184510 101 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm27390-201ENSMUST00000184516 176 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm42599-201ENSMUST00000201308 469 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 CT025553.1-201ENSMUST00000226292 299 ntBASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcf11G3X9Z4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Gm13182-201ENSMUST00000122241 312 ntBASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Gm21778-201ENSMUST00000178779 471 ntBASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcf11G3X9Z4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 AC154257.1-202ENSMUST00000224729 843 ntBASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 AC164618.2-201ENSMUST00000224770 573 ntBASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 AC164437.3-201ENSMUST00000228323 347 ntBASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcf11G3X9Z4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms