Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm14270-201ENSMUST00000118388 846 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm24248-201ENSMUST00000157321 322 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm19587-201ENSMUST00000191395 545 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm11979-201ENSMUST00000119629 743 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm12274-201ENSMUST00000120062 385 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm26047-201ENSMUST00000157308 113 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm18201-201ENSMUST00000174735 875 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm28937-201ENSMUST00000185413 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm29400-201ENSMUST00000187208 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm28662-201ENSMUST00000188446 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm28251-201ENSMUST00000188835 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm37318-201ENSMUST00000194325 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm38017-201ENSMUST00000194768 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm37826-201ENSMUST00000195329 322 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm37287-201ENSMUST00000195449 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm37793-201ENSMUST00000195548 695 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm26047-202ENSMUST00000198840 115 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm18561-201ENSMUST00000206027 804 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm44647-201ENSMUST00000207402 428 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.43□□□□□ -0.58
Colca2F8VPY8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 201.2 ms