Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm12036-201ENSMUST00000120008 530 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm11424-201ENSMUST00000121929 829 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm20614-201ENSMUST00000177106 632 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm44958-201ENSMUST00000203734 736 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm6007-201ENSMUST00000208170 823 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh1F7BJK1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm26927-201ENSMUST00000182385 965 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm27847-201ENSMUST00000183711 107 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm27375-201ENSMUST00000183799 107 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm27839-201ENSMUST00000184242 106 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm28196-201ENSMUST00000187719 640 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm45930-201ENSMUST00000221330 292 ntBASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh1F7BJK1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms