Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm15352-201ENSMUST00000118696 270 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm13888-201ENSMUST00000119148 422 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm27438-201ENSMUST00000183480 110 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm38117-201ENSMUST00000194653 939 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.58□□□□□ -0.08
Ube4aE9Q735 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.58□□□□□ -0.08
Ube4aE9Q735 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm22920-201ENSMUST00000102175 109 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm8737-201ENSMUST00000122208 642 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm29499-201ENSMUST00000189151 486 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm28329-201ENSMUST00000191208 689 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm29171-201ENSMUST00000191397 486 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.57□□□□□ -0.08
Ube4aE9Q735 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4aE9Q735 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm44124-201ENSMUST00000204159 472 ntBASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm9463-201ENSMUST00000206707 601 ntBASIC14.56□□□□□ -0.08
Ube4aE9Q735 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.56□□□□□ -0.08
Ube4aE9Q735 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4aE9Q735 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms