Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm5159-201ENSMUST00000212733 1652 ntBASIC6.57□□□□□ -1.36
Herc1E9PZP8 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 CT030170.2-201ENSMUST00000223267 126 ntBASIC6.57□□□□□ -1.36
Herc1E9PZP8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm6285-201ENSMUST00000122012 498 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm19918-201ENSMUST00000194858 400 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm43564-201ENSMUST00000196185 211 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 AC108416.3-201ENSMUST00000226148 557 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 CT010505.2-201ENSMUST00000227918 998 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm37513-201ENSMUST00000194830 2268 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm38378-201ENSMUST00000195153 2268 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm2420-201ENSMUST00000119864 2149 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm12817-201ENSMUST00000119622 610 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm23916-201ENSMUST00000158484 399 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm24352-201ENSMUST00000158966 125 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm42660-201ENSMUST00000197733 947 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm25483-201ENSMUST00000083224 227 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm14538-201ENSMUST00000122019 1327 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Adra1a-206ENSMUST00000225182 2337 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm12133-201ENSMUST00000121775 661 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Mir7058-201ENSMUST00000184637 75 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm43460-201ENSMUST00000202491 1057 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 AC163646.3-202ENSMUST00000228685 691 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC6.56□□□□□ -1.36
Herc1E9PZP8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Herc1E9PZP8 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Herc1E9PZP8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms