Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Gm21811-201ENSMUST00000096485 930 ntBASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srp54bE9PXC0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Srp54bE9PXC0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm14058-201ENSMUST00000116082 735 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm13035-201ENSMUST00000117496 342 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm7722-201ENSMUST00000120646 741 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm25881-201ENSMUST00000157783 103 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm43184-201ENSMUST00000197247 542 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm18711-201ENSMUST00000199341 750 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm45118-201ENSMUST00000208928 825 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm5369-201ENSMUST00000217499 588 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gm26448-201ENSMUST00000082446 203 ntBASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.02□□□□□ -0.49
Srp54bE9PXC0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms