Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm11500-201ENSMUST00000118237 601 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm9673-201ENSMUST00000119287 781 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm11960-201ENSMUST00000122068 925 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm24248-201ENSMUST00000157321 322 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm5996-201ENSMUST00000211110 718 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Col4a6B1AVK5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm4294-201ENSMUST00000105169 614 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm14213-201ENSMUST00000119778 768 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm15549-201ENSMUST00000121595 622 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm15528-201ENSMUST00000117821 864 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm13351-201ENSMUST00000118087 414 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm15003-201ENSMUST00000118884 446 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm42433-201ENSMUST00000196806 940 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm40879-201ENSMUST00000220759 612 ntBASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a6B1AVK5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col4a6B1AVK5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms