Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Trav12d-1A0N8R0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm13736-201ENSMUST00000119272 253 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm12502-201ENSMUST00000120197 444 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm13342-201ENSMUST00000121055 207 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm23984-201ENSMUST00000157139 203 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm9002-201ENSMUST00000178437 499 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm42693-201ENSMUST00000196779 631 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm9908-201ENSMUST00000211534 448 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav12d-1A0N8R0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms